Hi,
can you please check the exact version of the GATK jar file?
Currently, only 2.8 is supported. We stopped maintaining it, due to
licensing issues - which might be resolved in a 4.0 version.
If you have GATK2.8, it should work hopefully.
Cheers,
Bjoern
Am 31.05.2017 um 05:36 schrieb OLABODE O
Hi,
which version of GATK are you using? From your email it seems you may be
using GATK3, which is not supported by the Galaxy GATK2 wrappers.
Cheers,
Nicola
On 31/05/17 04:36, OLABODE OLUWASEUN AJAYI wrote:
Hi Dev,
I am running a local instance Galaxy for developing a variant calling
pipel
My galaxy instance has suddenly begun having jobs failing. The error
below is what is produced by the log.
galaxy.objectstore CRITICAL 2017-05-31 01:44:49,932 None delete error
[Errno 39] Directory not empty:
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Please keep all replies o
