Re: [galaxy-dev] Fwd: Job Script Integrity with GalaxyKickStart (galaxy-dev Digest, Vol 137, Issue 5)

2017-11-08 Thread Christophe Antoniewski
Hi John and Marius, So, I am assuming I have some problem with my slurm configuration, does > that sounds accurate? Maybe it would help to see that. I have a couple of complicated experiences with slurm config but up to now it is with Ubuntu 16.04 Xenial Best - Chris Christophe Antoniewski

Re: [galaxy-dev] AWS launch error

2017-11-08 Thread Enis Afgan
Hi David, Do you perhaps have credentials stored on the beta server? If not, and don't mind storing them, you can try that. I'm not having an issue at the moment but I know Nuwan has done some changes recently that I did not catch up with yet. CC'ing him in case he has additional input. On Tue,

Re: [galaxy-dev] Fwd: Job Script Integrity with GalaxyKickStart (galaxy-dev Digest, Vol 137, Issue 5)

2017-11-08 Thread John Letaw
Hi Chris, I am changing my mind, not thinking it is a slurm config problem. I can submit jobs from this vm with the ‘galaxyuser’ user and there is no problem. In the logs, I can see a line that says the script is being submitted, then another line that echos the native specification. After

Re: [galaxy-dev] AWS launch error

2017-11-08 Thread David Kovalic
Enis, To clarify, our credentials are in the beta system which dosn't work. To me it seems like an aws authentication issue. David On Wed, Nov 8, 2017, 7:22 PM David Kovalic wrote: > Enis, > > Yes our credentials are in the beta system. > > Lmk if you need me to do

Re: [galaxy-dev] AWS launch error

2017-11-08 Thread David Kovalic
Enis, Yes our credentials are in the beta system. Lmk if you need me to do anything to help troubleshoot. Right now we are recreating systems through aws. Are there docs for running cloudman from cli? This would get us going in the short term. David On Wed, Nov 8, 2017, 6:33 PM Enis Afgan