Dear Galaxy Team and al.,
To improve the usability, it would be nice to group parameters in some
kinds of "fieldset".
We can already hide some advanced options with conditional but ...
But it's just a personal wishes
And as always, great job :)
Cheers
Gildas
_
Hi,
We have a problem on our production instances since one or two years
(never found the time to write it and we still hope to find by ourself).
Some jobs stay in "waiting" status (grey) indefinitely.
Job ID User Last Update Tool State Inputs Command Line Job
Runner PID/Cluster ID
galaxy version are you?
2015-06-30 7:36 GMT-05:00 Gildas Le Corguille
mailto:lecorgui...@sb-roscoff.fr>>:
Hi,
We have a problem on our production instances since one or two
years (never found the time to write it and we still hope to find
by ourself).
Some jobs s
Hello Sarah,
Check if you not use some spaces instead of tab characters in your .loc
to divise your fields.
Gildas
Le 10/07/2015 10:16, Sarah Maman a écrit :
Hello,
The Galaxy "Variant Annotator" tool uses this loc file :
tool-data/gatk2_picard_indexes.loc
This file is available in too
Hello again,
My bad !
You need this :
oviAri1oviAri1Ovis:oviAri1
/bank/Galaxy/oviAri1/current/flat/picard_index/oviAri1.fa
A plus :)
Gildas
Le 10/07/2015 10:16, Sarah Maman a écrit :
Hello,
The Galaxy "Variant Annotator" tool uses this loc file :
tool-data/gatk2_picard_indexes.l
Hi,
Nicola is right
But I believe that your outputs aren't correctly declared.
files_path keep all your files in their original directory. It's usefull
when you want to build a HTML page to wrap your several outputs.
In your case, I propose this command line
