[galaxy-dev] Unable to run simple Docker tool

2015-08-18 Thread Mikel Egaña Aranguren
a string to it. The image: FROM busybox:ubuntu-14.04 MAINTAINER Mikel Egaña Aranguren RUN mkdir /sadi COPY test-io.sh /sadi/ RUN chmod a+x /sadi/test-io.sh ENV PATH $PATH:/sadi The test-io.sh script within the image: #!/bin/sh cat $1 echo "AAA" Invoking the container and execu

Re: [galaxy-dev] Unable to run simple Docker tool

2015-08-19 Thread Mikel Egaña Aranguren
ug the problem outside of Galaxy. Maybe using docker > logs for instance. If the logs don't reveal anything try dropping some > of the command-line arguments and see if that is the problem - e.g. " > --net none " or " -u 1001". > > -John > > On Tue, Aug

Re: [galaxy-dev] Unable to run simple Docker tool

2015-08-28 Thread Mikel Egaña Aranguren
mples/hello--/home/mikel/UPV-EHU/SADI-Docker-Galaxy/galaxy/database/files/000/dataset_5.dat 2015-08-19 18:21 GMT+02:00 Mikel Egaña Aranguren < mikel.egana.arangu...@gmail.com>: > > > 2015-08-19 15:50 GMT+02:00 John Chilton : > >> I don't know to be honest - a couple o

Re: [galaxy-dev] Unable to run simple Docker tool

2015-08-29 Thread Mikel Egaña Aranguren
sClient.java:61) ... 5 more Any ideas? Thanks The client: /** * Copyright (c) 2015 Mikel Egaña Aranguren * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either v

Re: [galaxy-dev] "--net None" option in Galaxy (Docker)

2015-12-18 Thread Mikel Egaña Aranguren
ns to this > and other Galaxy lists, please use the interface at: > https://lists.galaxyproject.org/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > -- Mikel Egaña Aranguren, Ph.D. http://mikeleganaaranguren.