[galaxy-dev] ldap module not present

I'm trying out the new LDAP auth features in v15.05. I'm getting the following error in my logs: galaxy.auth.providers.ldap_ad DEBUG 2015-05-15 08:53:43,886 LDAP authenticate: could not load ldap module this is from 'import ldap' failing in lib/galaxy/auth/providers/ldap_ad.py Should there be

Re: [galaxy-dev] Galaxy Startup Failing

alaxy script then > I am back to the problem of python not being able to write to > /var/run/galaxy.pid > > Keith > > On Nov 3, 2015, at 7:39 PM, Will Holtz <who...@lygos.com> wrote: > > Hi Keith, > > I've dealt with similar situations by adding the sourcing of

Re: [galaxy-dev] galaxy.ini tool_dependency_dir change

> 655 West 12th Avenue, Vancouver, British Columbia, V5Z 4R4 Canada > > From: Will Holtz [who...@lygos.com] > Sent: Wednesday, September 09, 2015 11:10 AM > To: Dooley, Damion > Cc: galaxy-...@lists.bx.psu.edu > Subject: Re: [gal

Re: [galaxy-dev] pbs_python can't be installed via scramble

Hi Makis, The thread I posted does have the exact same container.hpp error and proposes a solution. Did you try setting your PBS_PYTHON_INCLUDEDIR to point to your torque/include directory, as mentioned in that thread? from the thread: export PBS_PYTHON_INCLUDEDIR=/usr/local/torque/include/

Re: [galaxy-dev] pbs_python can't be installed via scramble

Here is an old thread that looks rather similar to your problems: https://www.mail-archive.com/galaxy-dev@lists.galaxyproject.org/msg00078.html -Will On Tue, Sep 22, 2015 at 2:43 AM, Makis Ladoukakis wrote: > Hello everyone, > > I'm trying to set up a Galaxy instance

Re: [galaxy-dev] iRODS

Please consider posting the content of your doc to the Galaxy Community Log Board , so that other people can find it. -Will On Wed, Mar 9, 2016 at 3:01 AM, Mikael Loaec < mikael.lo...@versailles.inra.fr> wrote: > Hi, > > @URGI, we have sucessfully

Re: [galaxy-dev] Problem upgrading

There is a 'git' missing in there. Try: sudo git checkout master && git pull --ff-only origin master -Will On Fri, May 20, 2016 at 11:42 AM, Scott Szakonyi wrote: > Hello, > > I'm currently running Galaxy 16.01, and I'd like to upgrade to 16.04. > However, when I

Re: [galaxy-dev] Problem upgrading

e trick. > > -Scott > > On Fri, May 20, 2016 at 2:48 PM, Will Holtz <who...@lygos.com> wrote: > >> There is a 'git' missing in there. Try: >> sudo git checkout master && git pull --ff-only origin master >> >> -Will >> >> >> On Fri, Ma

Re: [galaxy-dev] apache on ubuntu

You may need to load the mod_rewrite module. This can be done via: sudo a2enmod rewrite -Will On Mon, Sep 5, 2016 at 7:10 AM, Raymond Wan wrote: > Hi Jochen, > > > > On Sat, Sep 3, 2016 at 2:31 AM, Bick Jochen > wrote: > > RewriteEngine

Re: [galaxy-dev] apache on ubuntu

a2enmod adds an apache module to your list of enabled modules. Previously enabled modules will remain enabled. -Will On Tue, Sep 13, 2016 at 12:10 AM, Jochen Bick wrote: > Hi Will and Ray, > > > > You may need to load the mod_rewrite module. This can be done via: > >