Re: [galaxy-dev] Data Collections

2015-06-25 Thread John Chilton
For the list sake - I think we figured this out and IRC and it had to do with having two versions of Galaxy installed on the same machine. Alexander - let me know if this issue is not resolved. -John On Mon, Jun 15, 2015 at 4:02 PM, Alexander Vowinkel vowinkel.alexan...@gmail.com wrote: Thank

Re: [galaxy-dev] Data Collections

2015-06-15 Thread John Chilton
On Wed, Jun 10, 2015 at 4:04 PM, Alexander Vowinkel vowinkel.alexan...@gmail.com wrote: Hi Folks, thank you so far for the previous help. I got much further. Now I'm stuck with data collections. Because this is quite a list, I appreciate also answers to parts of my questions ;) I have two

Re: [galaxy-dev] Data Collections

2015-06-15 Thread Alexander Vowinkel
Thank you for this detailed descriptions! I already have a followup question. I'm working on Galaxy Cloudman: Galaxy is at revision: 93cda3eb81 (master branch) from 11 Jun 2015) But I just can find Build dataset pair|list, not List of Dataset Pairs like in the video. At what version is that

Re: [galaxy-dev] data collections - workflow - bug?

2015-03-30 Thread John Chilton
Torsten - thanks for reporting this. This bug was reported a few more times - and after several false starts I think we have finally found a fix (with a lot of help from Marius van den Beek, Philip Mabon, Aaron Petkau, and Franklin Bristow - big thanks to each of them). Pull Request with Fix:

Re: [galaxy-dev] data collections - workflow - bug?

2015-01-26 Thread John Chilton
Hey, Really intensive database operations including datasest collections but other things too like multi-running tools or workflows over many individual datasets for instance - can very easily overwhelm the default sqlite database. This is frustrating and shouldn't happen - but it does