Re: [galaxy-dev] Data Libraries: Unable to Link to Files When Paths Contain Spaces

2015-07-17 Thread John Chilton
This is a good news, bad news sort of thing. I have opened a PR to fix the actual uploads here - https://github.com/galaxyproject/galaxy/pull/474. But I think many tools don't properly quote file paths with names in them - so I suspect you will find a lot of tool bugs using these files. Thanks for

[galaxy-dev] Data Libraries: Unable to Link to Files When Paths Contain Spaces

2015-07-06 Thread Joseph Brent Greer
Hi All, We're having problems adding files to data libraries. We'd like to create links to files instead of copying them into Galaxy. We can create links if there aren't spaces in the paths. Also, we can copy files into libraries even if there are spaces in the paths. Unfortunately, we cannot

Re: [galaxy-dev] Data Libraries

2015-04-29 Thread Ryan G
We have 4 different people in our sequencing lab each working on different projects. Once sequencing is done, they want to be able to create a data library specific for that project. Giving them all admin rights is not what we want, but instead giving them the ability to add data libraries so tha

Re: [galaxy-dev] Data Libraries

2015-04-24 Thread Nicola Soranzo
You may just use a different folder for each project inside a "Sequencing" library. Would that work? Nicola Il 24.04.2015 13:10 Ryan G ha scritto: > This could work. In the long run though, after sequencing for a project, we'd like them people in the sequencing lab to be able to add the data

Re: [galaxy-dev] Data Libraries

2015-04-24 Thread Ryan G
This could work. In the long run though, after sequencing for a project, we'd like them people in the sequencing lab to be able to add the data to Galaxy in project specific libraries, without having an admin create a library for them. On Thu, Apr 23, 2015 at 4:56 PM, Martin Čech wrote: > Hello

Re: [galaxy-dev] Data Libraries

2015-04-23 Thread Martin Čech
Hello Ryan, it is currently not possible to give users rights to create data libraries. However you can create the libraries for them and give them rights to create and manage subfolders (doing the same things but one level below). Would that address your goal? Martin On Thu, Apr 23, 2015 at 4:3

[galaxy-dev] Data Libraries

2015-04-23 Thread Ryan G
Hi all - We are trying to use Galaxy as a mechanism for our sequencing lab to create data libraries for data they generate. I noticed in the docs, only Admins are able to create data libraries. Is there a way to change this? I'd like to give specific users in our group this ability without givin