Re: [galaxy-dev] Docker tools

2016-03-02 Thread Björn Grüning
Hi Abdulrahman, this does not belong to a tool, this is more a configuration for an admin. The tools does not care where it runs. So what you need to do is to set up a job destination and configure your tools to use this destination. Here is a small documentation about it:

Re: [galaxy-dev] Docker tools

2016-03-02 Thread Marius van den Beek
Hello Abdulrahman, I believe you can control the docker host in the job_conf.xml. https://github.com/galaxyproject/galaxy/blob/dev/config/job_conf.xml.sample_advanced#L227 I haven't' tried this yet, but it seems that it should work. Cheers, Marius On 2 March 2016 at 09:55, Abdulrahman Azab

[galaxy-dev] Docker tools

2016-03-02 Thread Abdulrahman Azab
Hi Galaxy, I'm working on a project for running galaxy on the top of a docker swarm cluster. The docker tag in the tool xml so far supports access only to the local docker host. To submit to the swarm manager, the command should be: $ docker -H tcp://: run ... instead of: $ docker run ...