Hello all,

As many of you are interested in visualization I wanted to draw your
attention to this NEW course on biological data visualization at Cold
Spring Harbor, which is being led by some of our colleagues at the Texas
Advanced Computing Center (who provide substantial support for Galaxy
main). It will be very interesting to think about how immersive
visualizations can be implemented in Galaxy in the future.

-- jt

---------- Forwarded message ----------
From: Cold Spring Harbor Laboratory <meetm...@cshl.edu>
Date: Tue, Jul 12, 2016 at 9:02 AM
Subject: Immersive Approaches to Biological Data Visualization CSHL Course
December 2016
To: ja...@jamestaylor.org


<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDlYRP0pJDH-RL0Wv10bynsNqyrzAMcIJq9SvbnsMyc562ldfAy5JxzPPPIbdt_skYIT31lXd2EP7HGdLsQD2S8J_c_EXuN1Itnzv_4ER0WnyaEv5NvMkUU4=&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDvnwhOWwcCnnV3dA45nWCDxpq77T7goVlc4xDwct-G-NVQ7t0vC2CorkRx3TicCYOsZ93PVY1dtQ15xRO86OMy4Do_BI47UA2x1y2OdURf-q2wiFZgGmEgPJE9TMX3p7h3atiTEkMziK9FcwdySbYZcVDVpRgUwAKKgwxnUK-03tEDPTLSAerEQ=&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>
Immersive Approaches to Biological Data Visualization
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDvnwhOWwcCnnV3dA45nWCDxpq77T7goVlc4xDwct-G-NVQ7t0vC2CorkRx3TicCYOsZ93PVY1dtQ15xRO86OMy4Do_BI47UA2x1y2OdURf-q2wiFZgGmEgPJE9TMX3p7h3atiTEkMziK9FcwdySbYZcVDVpRgUwAKKgwxnUK-03tEDPTLSAerEQ=&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>
December 1 - 10, 2016
*Applications due: August 15*
*Instructors*

*Kelly Gaither,* Texas Advanced Computing Center
*Matthew Vaughn,* Texas Advanced Computing Center

This course will explore the new frontier of immersive, interactive
scientific visualization. It is aimed at researchers who wish to design and
implement innovative visualization tools to help address biological or
biomedical research questions. As part of their research programs, course
participants will ideally have a need to visualize genomic or systems
biology data, anatomical structures and models, scientific simulations,
and/or other domains that generate complex, multidimensional, and often
very large data sets.

Through a combination of detailed lectures and intensive hands-on computing
exercises led by course instructors, students will learn the principles of
information and scientific visualization. However, rather than relying on
simplified representations of complex data, students will learn these
visualization principles within the newly emerging context of immersive
augmented and virtual reality. They will work with tools such as Unity 3D
and Blender, as well as scripting environments such as Bash and Python, to
craft data visualizations using the Oculus Rift
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDvnwhOWwcCnnPR-eOQ0hma4JRM5k_KOVCBsc1195yK7LGSovq93SApzUgY-Bi4bhJrTEQnhUjBqubQWN1tFB8LUrHsg969itjGNqfTG7mHLcG2FazOZKJGyuUEP-UmJPH3zTwvNw8_bf&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>
virtual reality headset and Leap Motion
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDvnwhOWwcCnnBR2ruonJUktUe9F-tl2ytEZ7TM_2_Pzrb5QrlYBcUYxlR7znZg4iJ49ehxoEwOsouTWnDrxwSjF8VewVWtjV2w3voUSSF9_PMzY4vQ91CFG5O8a6HFb6dw==&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>
gesture sensor. Students will apply the concepts and techniques covered in
class exercises to create an independent virtual reality data visualization
project. Additionally, the hands-on training will be supplemented by guest
lectures from some of the leading experts working in data visualization
today.

*Selected Major Topics*

   - Overview of Scientific Visualization
   - Perception & Color
   - Information Visualization
   - Scientific Visualization
   - Importing Scientific Data into an Immersive Visualization Framework
   - Tool Development Using Oculus and Leap Motion

*Invited Speakers*

*Min Chen,* Oxford University, U.K.
*David Ebert,* Purdue University School of Electrical & Computer Engineering
*Robert Kosara,* Tableau Software, Inc.
*Brian McCann,* Texas Advanced Computing Center
*Mariah Meyer,* University of Utah
*Hanspeter Pfister,* Harvard University School of Engineering & Applied
Sciences
*Amitabh Varshney,* University of Maryland College Park

Please click this link to go to the Immersive Approaches to Biological Data
Visualization course website for more info.
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDvnwhOWwcCnnV3dA45nWCDxpq77T7goVlc4xDwct-G-NVQ7t0vC2CorkRx3TicCYOsZ93PVY1dtQ15xRO86OMy4Do_BI47UA2x1y2OdURf-q2wiFZgGmEgPJE9TMX3p7h3atiTEkMziK9FcwdySbYZcVDVpRgUwAKKgwxnUK-03tEDPTLSAerEQ=&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>


 www.cshl.edu/meetings
<http://r20.rs6.net/tn.jsp?f=001KDLtFLPEpFJ3qaBaXgqiU3PiLHpGUgM6M05LbOYM3ePe_PYhKyzxDjnYQ74YufuqLBOp_V2suzxCrPPHTNnKHzvvOrqBDjz1URUu5NktDJoC07UqCHYveasqUXPFyP-gDXUvvdiwr1wvDp1rMa7tjYnRlXoyxUelS3UvPN2-33Il32y88sMD4BxXep82gccg&c=zsbPbtMJzTuSfXtBB8ziQiMs_ocOB49u4dsVbIQLlFiSRi2mPCIWsA==&ch=PyOIm-Y4pQTbnVInG4ONYoiDQnaFACDifB-pM9ZiOzGmkWs1Maywqg==>

Cold Spring Harbor Laboratory Meetings & Courses | 1 Bungtown Road Cold
Spring Harbor, 11724
Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11743
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