Dear all, I've been having some problems with some tool dependencies. With most of them, after a few iterations of uninstall and install, the problem seems to go away. (I'm not too sure about the reason as I didn't take good notes while working out the problem to determine what I finally did right.)
However, I'm having a problem with samtools that differs from the samtools problem I had a few months ago (about the system's version of samtools being out of date). Both package_samtools_1_1 and package_samtools_1_2 seem to have the similar problem. For example, with package_samtools_1_2, I see this: ----- Missing repository dependencies: package_ncurses_5_9 5e1760c773ba iuc Uninstalled, missing tool dependencies Installed repository dependencies: package_zlib_1_2_8 63a4a902cda2 iuc Installed package_ncurses_5_9 335ebf512407 iuc Installed ----- I don't quite understand why package_ncurses_5_9 appears twice with two different versions. Is this a problem with something I did on my system? For package_samtools_1_1, package_ncurses_5_9 (5e1760c773ba) is also missing. But under "Installed tool dependencies", ncurses 5.9 is Installed. Does anyone have an idea of what I could do to resolve this? As an aside, can someone explain the difference between the owner "iuc" and "devteam"? I did find https://wiki.galaxyproject.org/IUC, but couldn't find a description of devtools. I have two versions of package_samtools_0_1_19 installed -- one from iuc and the other from devteam. Is it fine to leave this alone? Thank you! Ray ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
