Hello, I've been trying to get working a local galaxy installation, using nginx with the upload module as a proxy.
It all seems to work, except uploading files to Galaxy, where I get a "GET /_upload/ HTTP/1.1" 404 and nothing else Ic an find in the logs. There must be some misconfiguration somewhere, but I can't sport it. Could you help me? Here's my nginx.conf: user galaxy; > worker_processes 10; > pid /run/nginx.pid; > > events { > worker_connections 768; > } > http { > gzip on; > gzip_http_version 1.1; > gzip_vary on; > gzip_comp_level 4; > gzip_proxied any; > gzip_types text/plain text/css application/x-javascript text/xml > application/xml text/javascript application/json; > gzip_buffers 16 8k; > gzip_disable "MSIE [1-6].(?!.*SV1)"; > upstream galaxy_app { > server localhost:8080; > } > server { > client_max_body_size 10G; > location / { > proxy_pass http://galaxy_app; > proxy_set_header X-Forwarded-Host $host; > proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for; > } > location /_x_accel_redirect/ { > internal; > alias /; > } > location ~ > ^/plugins/visualizations/(?<vis_name>.+?)/static/(?<static_file>.*?)$ { > alias > /home/galaxy/galaxy/config/plugins/visualizations/$vis_name/static/$static_file; > > expires 24h; > } > location /static { > alias /home/galaxy/galaxy/static; > expires 24h; > } > location /static/style { > alias /home/galaxy/galaxy/static/june_2007_style/blue; > expires 24h; > } > location /static/scripts { > alias /home/galaxy/galaxy/static/scripts/packed; > expires 24h; > } > location /favicon.ico { > alias /home/galaxy/galaxy/static/favicon.ico; > expires 24h; > } > location /robots.txt { > alias /home/galaxy/galaxy/static/robots.txt; > expires 24h; > } > location /_upload { > upload_store /home/galaxy/galaxy/database/tmp/upload_store; > upload_pass_form_field ""; > upload_set_form_field "__${upload_field_name}__is_composite" > "true"; > upload_set_form_field "__${upload_field_name}__keys" "name > path"; > upload_set_form_field "${upload_field_name}_name" > "$upload_file_name"; > upload_set_form_field "${upload_field_name}_path" > "$upload_tmp_path"; > upload_pass_args on; > upload_pass /_upload_done; > } > location /_upload_done { > set $dst /api/tools; > if ($args ~ nginx_redir=([^&]+)) { > set $dst $1; > } > rewrite "" $dst; > } > location /plugins { > alias /home/galaxy/galaxy-dist/config/plugins; > } > } > } > And here's my galaxy.ini: [server:handler0] > port = 8090 > host = 127.0.0.1 > use_threadpool = true > threadpool_workers = 10 > > [server:handler1] > port = 8091 > host = 127.0.0.1 > use_threadpool = true > threadpool_workers = 10 > > [server:handler2] > port = 8092 > host = 127.0.0.1 > use_threadpool = true > threadpool_workers = 10 > > [server:handler3] > port = 8093 > host = 127.0.0.1 > use_threadpool = true > threadpool_workers = 10 > > [server:main] > port = 8080 > host = 0.0.0.0 > use_threadpool = True > threadpool_workers = 30 > threadpool_kill_thread_limit = 10800 > > [filter:gzip] > > [filter:proxy-prefix] > prefix = /galaxy > > [app:main] > paste.app_factory = galaxy.web.buildapp:app_factory > database_connection = postgresql://galaxy:not_the_actual_password@localhost > /galaxy?host=/var/run/postgresql > nginx_x_accel_redirect_base = /_x_accel_redirect > nginx_upload_store = database/tmp/upload_store > nginx_upload_path = /_upload > tool_dependency_dir = dep_dir > use_nglims = False > nglims_config_file = tool-data/nglims.yaml > static_enabled = True > debug = False > use_interactive = False > id_secret = ValarDohaerys > admin_users = adria.cer...@ctns.cat, galac...@galaxy.gal > allow_user_impersonation = True > allow_user_dataset_purge = True > new_user_dataset_access_role_default_private = True > expose_user_name = True > master_api_key = heavysplatling > track_jobs_in_database = True > enable_job_recovery = True > > [galaxy_amqp] > > [uwsgi] > processes = 44 > stats = 127.0.0.1:9191 > socket = 127.0.0.1:4001 > pythonpath = lib > threads = 12 > logto = /home/galaxy/uwsgi.log > master = True Thank you in advance, Adrià -- *Adrià Cereto i Massagué* Centre for Omic Sciences (COS) www.omicscentre.com Servei de Recursos Científics i Tècnics (SRCiT) Universitat Rovira i Virgili Av. Universitat, 1. 43204 Reus (Catalonia) Tel: +34 977 77 69 32 <%2B34%20977%2077%2014%2009> Extensió URV: 4838 Languages: Català, Español, English, Français, Deutsch, Português Important Notice <http://www.gnu.org/philosophy/no-word-attachments.html>
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