Re: [galaxy-dev] optional tool arguments

2015-04-29 Thread Ryan G
Yes it took some experimenting but I finally figured it out. Sent from my iPhone > On Apr 29, 2015, at 4:51 AM, Peter Cock wrote: > > Yes, for example: > https://github.com/peterjc/pico_galaxy/blob/master/tools/seq_filter_by_id/seq_filter_by_id.xml > > Peter > >> On Wed, Apr 29, 2015 at 8:23

Re: [galaxy-dev] optional tool arguments

2015-04-29 Thread Peter Cock
Yes, for example: https://github.com/peterjc/pico_galaxy/blob/master/tools/seq_filter_by_id/seq_filter_by_id.xml Peter On Wed, Apr 29, 2015 at 8:23 AM, Hans-Rudolf Hotz wrote: > Hi Ryan > > I guess you can work with filters, see: > > https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.

Re: [galaxy-dev] optional tool arguments

2015-04-29 Thread Hans-Rudolf Hotz
Hi Ryan I guess you can work with filters, see: https://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax#A.3Cdata.3E_tag_set Regards, Hans-Rudolf On 04/28/2015 06:28 PM, Ryan G wrote: Hi - I'm implementing a new tool in Galaxy. The tool either takes 1 or 2 fastq files as input. If 1

[galaxy-dev] optional tool arguments

2015-04-28 Thread Ryan G
Hi - I'm implementing a new tool in Galaxy. The tool either takes 1 or 2 fastq files as input. If 1 file is specified, then 1 output file is created. If 2 inputs are specified, then 2 output files will be created. How do I specify the optional output parameter? I'm using this as my tool descrip