Re: [galaxy-dev] Bug on current history when using prefix in galaxy input file

2015-07-29 Thread Dannon Baker
Hi Ata,

I'm a little stumped by this one, unable to replicate it here.  Out of
curiosity, does it work if you remove the trailing slashes from your prefix
and cookie_path (when set)?

-Dannon

On Wed, Jul 15, 2015 at 7:15 PM, Ata Roudgar aroud...@sfu.ca wrote:



 Hi,

 I am using the most recent version of Galaxy. There seems to be a bug in
 viewing the current (active) history when I use prefix in galaxy input file.

 Here is the detail:

 When I do not use prefix, e.g., in /config/galaxy.in :

 prefix = /
 cookie_path = /

 and run galaxy server, I can upload a file and I can see my uploaded file
 in the current history even after I refresh the web browser (e.g., close
 and reopen the web browser) which seems to be working fine. However when I
 use prefix, e.g. in /config/galaxy.in :

 prefix = /galaxy-1/
 cookie_path = /galaxy-1/

 then after I upload a file and refresh the browser I do not see the
 uploaded file in the current (or active) history. It always shows me a new
 (clean history). This is a problem because I get a error which seems to be
 related to the history when I attempt to run any workflow.

 Any idea where the problem should be?

 Please note that I use external authentication but it shouldn't be matter
 because it is working when the prefix is /.

 Thanks a lot,
 Cheers,
 Ata


 
 Ata Roudgar
 Research Computing
 WestGrid Site
 IT Services
 Simon Fraser University
 Burnaby, British Columbia
 Canada  V5A 1S6

 phone: 778 782-8860
 fax:   778 782-4242

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Re: [galaxy-dev] Bug on current history when using prefix in galaxy input file

2015-07-29 Thread Ata Roudgar


Hi Dannon,

Thanks for reply. I did a test with other web browser and it 
seems that this problem persist only when I work with 
Firefox. With IE or Chrome the problem seems to be 
disappeared.



Thanks again.
Cheers,
Ata


On Wednesday 2015-07-29 16:25, Dannon Baker wrote:


Date: Wed, 29 Jul 2015 16:25:19
From: Dannon Baker dannon.ba...@gmail.com
To: Ata Roudgar aroud...@sfu.ca
Cc: galaxy-dev@lists.galaxyproject.org galaxy-dev@lists.galaxyproject.org,
   Franklin Bristow franklin.bris...@phac-aspc.gc.ca,
   Matthew Laird lai...@sfu.ca
Subject: Re: [galaxy-dev] Bug on current history when using prefix in galaxy
   input file

Hi Ata,

I'm a little stumped by this one, unable to replicate it here.  Out of 
curiosity, does it work if you remove
the trailing slashes from your prefix and cookie_path (when set)?

-Dannon

On Wed, Jul 15, 2015 at 7:15 PM, Ata Roudgar aroud...@sfu.ca wrote:


 Hi,

 I am using the most recent version of Galaxy. There seems to be a bug in 
viewing the current
 (active) history when I use prefix in galaxy input file.

 Here is the detail:

 When I do not use prefix, e.g., in /config/galaxy.in :

 prefix = /
 cookie_path = /

 and run galaxy server, I can upload a file and I can see my uploaded file 
in the current history
 even after I refresh the web browser (e.g., close and reopen the web 
browser) which seems to be
 working fine. However when I use prefix, e.g. in /config/galaxy.in :

 prefix = /galaxy-1/
 cookie_path = /galaxy-1/

 then after I upload a file and refresh the browser I do not see the 
uploaded file in the current
 (or active) history. It always shows me a new (clean history). This is a 
problem because I get a
 error which seems to be related to the history when I attempt to run any 
workflow.

 Any idea where the problem should be?

 Please note that I use external authentication but it shouldn't be matter 
because it is working
 when the prefix is /.

 Thanks a lot,
 Cheers,
 Ata


 
 Ata Roudgar
 Research Computing
 WestGrid Site
 IT Services
 Simon Fraser University
 Burnaby, British Columbia
 Canada  V5A 1S6

 phone: 778 782-8860
 fax:   778 782-4242

 ___
 Please keep all replies on the list by using reply all
 in your mail client.  To manage your subscriptions to this
 and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

 To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/







Ata Roudgar
Research Computing
WestGrid Site
IT Services
Simon Fraser University
Burnaby, British Columbia
Canada  V5A 1S6

phone: 778 782-8860
fax:   778 782-4242___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/