Re: [galaxy-dev] IOError kills collections

2015-12-10 Thread John Chilton
15.10 does checking that the job script written can be executed before the job is submitted and some file system syncing that really may help this issue. Hopefully this helps this particular case, in general though Galaxy does need to be better about resuming workflows over collections and retrying

Re: [galaxy-dev] IOError kills collections

2015-08-03 Thread Alexander Vowinkel
Cluster has workers, jobs running on main node is disabled. 2015-08-03 14:44 GMT-05:00 John Chilton : > Are you running jobs on the head node or just Galaxy? If this is a > consistent problem and you are running jobs on the head ndoe I would > disable that. > > As to resume just the failed jobs -

Re: [galaxy-dev] IOError kills collections

2015-08-03 Thread John Chilton
Are you running jobs on the head node or just Galaxy? If this is a consistent problem and you are running jobs on the head ndoe I would disable that. As to resume just the failed jobs - this is not currently possible but really should be ideally. https://trello.com/c/lxVJy7fs -John On Mon, Jul