Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-16 Thread Dannon Baker
Ok, yeah, that's pretty old :) I'd second the virtualenv suggestion, then, as a next easy thing to try. It's really easy to set up, and to test it you'd basically have to do this: (sudo) pip install virtualenv cd virtualenv .venv source .venv/bin/activate sh run.sh (in this now-activated virtual

Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-15 Thread Dooley, Damion
Ok, Daniel I don't really know egg vs site-packages install or how to change that; I tried upgrading our python 2.6 Paste to 1.7.5 but that didn't effect a change. Dannon I tried toasting compiled_templates directory, to no avail. The site was last upgraded in 2012. I'm afraid to mess with it

Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-15 Thread Daniel Blankenberg
Hi Damion, Another thing to try, is to set up and use a virutalenv, as the last time this error was reported (2012), it was suggested that a local site-packages version of Paste, instead of Galaxy’s provided egg, was to blame. Thanks for using Galaxy, Dan On Apr 15, 2015, at 5:36 PM, Dannon

Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-15 Thread Dannon Baker
Hrmm, was worth a shot. And, I *think* the logic is such that this won't change anything, but you can also (safely) wipe out that whole compiled_templates directory and see if that does anything. When you say old, just how old (hg summary) *is* this install? That might give us a few tips. On We

Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-15 Thread Dooley, Damion
Darn, didn't change anything. I deleted them both as galaxy system account and as root, but still that error on restart. Thanks for this tip though. d. Hsiao lab, BC Public Health Microbiology & Reference Laboratory, BC Centre for Disease Control 655 West 12th Avenue, Vancouver, British Columb

Re: [galaxy-dev] Older galaxy I'm keeping alive by drip feed, has problem restarting when I turn debug off.

2015-04-15 Thread Dannon Baker
Hi Damion, I'm suspicious of the compiled templates. Can you disable debug, then do something like "find /usr/local/galaxy/production/galaxy-dist -name '*.pyc' -delete", and then restart? -Dannon On Wed, Apr 15, 2015 at 4:16 PM, Dooley, Damion wrote: > I have an OLDER Galaxy install I was goi