Re: [galaxy-dev] Speedup Galaxy

[Nate Coraor]

It actually won't eat up that much, but keep an eye on it. If it's growing
too quickly you can decrease the frequency.

On Wed, Dec 14, 2016 at 9:48 AM, Jochen Bick 
wrote:

> Thanks Nate,
>
> So since today the speed is much better ... I changed to debug = False
> and activated the heartbeat. But I have no idea what the actual problem
> was...
>
> I hope I can deactivate it soon, because it said that it will eat up
> disk space rapidly...
>
> Cheers Jochen
>
>
> On 12.12.2016 18:37, Nate Coraor wrote:
> > Hi Jochen,
> >
> > You might want to enable the heartbeat (see the relevant options in
> > galaxy.ini), so you can see what the threads are actually doing during
> that
> > period. This should give you some insight on the culprit.
> >
> > --nate
> >
> > On Mon, Dec 12, 2016 at 9:40 AM, Jochen Bick 
> > wrote:
> >
> >> Thanks for your reply but in my case it did not solve the problem...
> >> has anyone else good ideas to speed up galaxy?
> >>
> >> Cheers Jochen
> >>
> >> On 09.12.2016 17:07, Hendrickson, Curtis (Campus) wrote:
> >>> Jochen
> >>>
> >>> We once had a similar, sudden performance problem, and found that the
> >> setting
> >>>
> >>>   Galaxy.ini: debug = False
> >>>
> >>> Had accidentally been re-set to "True". Having "debug" turned on
> really,
> >> really slows down the galaxy app process
> >>>
> >>> So, check that debug = False.
> >>>
> >>> Regards
> >>> Curtis
> >>>
> >> ___
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> >
>
> --
> ETH Zurich
> *Jochen Bick*
> Animal Physiology
> Institute of Agricultural Sciences
> Postal address: Universitätstrasse 2 / LFW B 58.1
> Office: Tannenstrasse 1 / TAN D 6.2
> 8092 Zurich, Switzerland
>
> Phone +41 44 632 28 25
> jochen.b...@usys.ethz.ch 
> www.ap.ethz.ch
>
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Re: [galaxy-dev] Speedup Galaxy

[Hendrickson, Curtis (Campus)]

Jochen

We once had a similar, sudden performance problem, and found that the setting

Galaxy.ini: debug = False

Had accidentally been re-set to "True". Having "debug" turned on really, really 
slows down the galaxy app process

So, check that debug = False. 

Regards
Curtis



-Original Message-
From: galaxy-dev [mailto:galaxy-dev-boun...@lists.galaxyproject.org] On Behalf 
Of Jochen Bick
Sent: Friday, December 9, 2016 6:05 AM
To: galaxy-dev@lists.galaxyproject.org
Subject: [galaxy-dev] Speedup Galaxy

We are running a Galaxy instance at our institute (version 15.10). Since some 
month the speed/reaction time of the interface drastically decrease. Sometimes 
there is a lack of more than a minute loading a single tool. I restarted galaxy 
without any improvements. We are working with up to 3 people on this instance 
that should not be the problem. 
Does anyone have any idea?
Disk-space?
uptime of our server?
big full database?
??

Cheers Jochen
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