Re: [galaxy-user] Galaxy in cloud (not Amazon)

2012-10-04 Thread Enis Afgan
Hi Anatoliy, If you're going to keep that cluster alive continuously, just set it up as per the page whose link you provided and you should be ok. If you plan on having multiple users have their own cloud clusters with Galaxy, you'll probably want to do what I suggested in my previous email. Good

[galaxy-user] Trim Galore Galaxy Integration

2012-10-04 Thread Sachit Adhikari
Hello. I would like to integrate this great tool Trim Galore in the local Galaxy. Has anyone did this before? If so, please provide me with the wrapper and .xml file? How can I integrate it? Best wishes, Sachit ___ The Galaxy User list

[galaxy-user] Trim Galore Galaxy Integration

2012-10-04 Thread Sachit Adhikari
Hello. I would like to integrate this great tool Trim Galore in the local Galaxy. How can I do that? Thanks in advance. ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at

Re: [galaxy-user] Fastq-groomer help

2012-10-04 Thread Nate Coraor
On Oct 3, 2012, at 2:02 PM, Kshama Aswath wrote: Hello: I have this 20GB data that I have uploaded onto my history and trying to get it run thr groomer. Just the first data set was uploaded yesterday and ran groomer on it and it was not done this morning. The message indicated taht it is

Re: [galaxy-user] Datasets Disappear following import of additional datasets

2012-10-04 Thread Jennifer Jackson
Hello Josh, Would you please generate a shared history link and send that back to me? If you could note the dataset # of the one that is missing, that would be helpful. Use Options (gear icon) - Share or Publish, click on the first button to create link, copy and past into a reply to this