Re: [galaxy-user] Downloading Output File thru FileZilla

2013-08-07 Thread Mayank Tandon
Hi Mark, As far as I know, you cannot. However, you can still download via FTP (much faster than HTTP using a web browser) using simple terminal commands, like curl in Linux/OSX. You can find out more in Jennifer's response to a previous question here:

Re: [galaxy-user] Bowtie: Outputting unmapped reads

2013-07-31 Thread Mayank Tandon
and re-upload, but that felt like overkill and time-consuming when I will inevitably want to tweak or re-run things. Also, installing a local instance is currently not an option for me (though it should be in a few months). In any case, I appreciate your help a lot! Thanks, again! Mayank Tandon

Re: [galaxy-user] Bowtie: Outputting unmapped reads

2013-07-31 Thread Mayank Tandon
...@googlemail.comwrote: On Wednesday, July 31, 2013, Mayank Tandon wrote: That's a neat trick, and I definitely wouldn't have thought of that approach, so thanks for that! After I finished writing this out, I realized it was super long. So here are the questions I'm asking up front, so you

[galaxy-user] Bowtie: Outputting unmapped reads

2013-07-18 Thread Mayank Tandon
is always preferable. So the question is: Is bowtie's '--un' option implemented in Galaxy and if so, how do I access it? Thanks in advance! Mayank Tandon ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other