Re: [galaxy-user] Could you please add Vibrio cholerae O1 biovar eltor str. N16961 to the reference genome？

Hello Tao, This genome is labeled in Galaxy as: Vibrio cholerae O1 biovar eltor str. N16961 (vibrChol1) However, I am guessing that the genome is not indexed for the tools you want to use it with. This means that you will need to use it as a custom reference genome. The first step is to

[galaxy-user] Could you please add Vibrio cholerae O1 biovar eltor str. N16961 to the reference genome？

Browser Chrom/Plasmid NameLength (bp)GC Content (%)Gene CountNCBI RefSeq AccessionchrIhttp://microbes.ucsc.edu/cgi-bin/hgTracks?db=vibrChol1position=chrI:1-2961149 296114947.692888NC_002505http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=NC_002505