Re: [galaxy-user] Do I need to have tool or dependencies installed in the server to run Galaxy tools?

2012-10-18 Thread Björn Grüning
Hi Sachit, the bismark wrapper is not finished, that's the reason its only in the test-toolshed. When its finished you do not neet bismark to be installed, but bowtie. Cheers, Bjoern > I integrated Bismark in Galaxy in my server. I downloaded Bismark from > Galaxy Tool shed. I just copied the Bi

[galaxy-user] Do I need to have tool or dependencies installed in the server to run Galaxy tools?

2012-10-17 Thread Sachit Adhikari
I integrated Bismark in Galaxy in my server. I downloaded Bismark from Galaxy Tool shed. I just copied the Bismark into /tools directory and added some codes in tool_conf.xml to make it visible. Do I need to install the real Bismark application in the server too? I am really confused here. Thanks _