Hi James,
The problem seems to have come from using the default all tables when
running the tool. The current assumption is that you will need to
re-run all in this set, not just the ones you highlight with the odd
calculations. For now, just run in smaller groups to obtain the correct
Hello Jen and other members, here is a history with the interval dataset I
uploaded and the results I get when doing a Profile Annotations summary. In
particular I am concerned about why in some cases tableChromosomeCoverage
tableRegionCoverage and allCoverage nrCoverage.
Hello, I tried using this tool today after inputting a bed file containing
1509 intervals of 100 bp each, spread across all 22 autosomes.
First of all, despite the fact that my input file contained intervals for
22 chromosomes, the value of allCoverage seemed to be the same as the
value of the
Hi James,
Full column descriptions are at the bottom of the Profile Annotations
tool form.
Are you working on the public Main Galaxy instance, or can you duplicate
this on Main https://main.g2.bx.psu.edu/ (usegalaxy.org)? It would be
helpful if you could share a history link and point to
4 matches
Mail list logo
