There was a temporary cluster issue, but it looks like jobs are running again. Try resubmitting your jobs now, and they should succeed.
-Dannon On May 1, 2012, at 8:30 PM, Jeremy Coate wrote: > Hi all, > FYI, I've gotten the same error recently when trying to run Bowtie (using > Galaxy Main). > Jeremy > > On Tue, May 1, 2012 at 4:37 PM, Richard Mark White <whit...@yahoo.com> wrote: > Hi, > Ive been trying to run cufflinks/cuffdiff but keep getting this error: Job > output not returned by PBS: the output datasets were deleted while the job > was running, the job was manually dequeued or there was a cluster error. > > is there a system issue or something with my data? > > r > > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ > > ___________________________________________________________ > The Galaxy User list should be used for the discussion of > Galaxy analysis and other features on the public server > at usegalaxy.org. Please keep all replies on the list by > using "reply all" in your mail client. For discussion of > local Galaxy instances and the Galaxy source code, please > use the Galaxy Development list: > > http://lists.bx.psu.edu/listinfo/galaxy-dev > > To manage your subscriptions to this and other Galaxy lists, > please use the interface at: > > http://lists.bx.psu.edu/ ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
