[galaxy-user] Errors when using 'Export to File' option in history pane

2011-07-18 Thread Mattias de Hollander
Hello, I am experiencing the same issues as described in Bug #588: https://bitbucket.org/galaxy/galaxy-central/issue/588/errors-when-using-export-to-file-option-in Are there more people with the same issue or is there a solution available? Thanks! Mattias -- Bioinformatician Netherlands

[galaxy-user] tailoring backend SGE submission requests to specific applications

2011-07-18 Thread Joseph Hargitai
Hi, is there a best practices, to replace general SGE requests with requests specific to applications - did anyone actually build such request options to be part of the selectable items in the apps menus? best, joe ___ The Galaxy User

Re: [galaxy-user] BAM files loading and mandatory grooming

2011-07-18 Thread Jennifer Jackson
Hello L-A, Would you be able to help with a bit more detail and testing? #2 sounds like it may be the issue, but without knowing more right now, I'll provided the next troubleshooting steps. 1 - this is in your own install and it is current with the latest -dist or are you using -central

Re: [galaxy-user] using files produced by Barcode Splitter

2011-07-18 Thread David K Crossman
Jeremy, The files need to be groomed using the FastQ Groomer so that they will end up in the fastqsanger state. Then your files will show up in the pull-down menus. David From: galaxy-user-boun...@lists.bx.psu.edu [mailto:galaxy-user-boun...@lists.bx.psu.edu] On Behalf Of