A new version of CloudMan for running Galaxy on Amazon cloud has been
released today. Any new cluster will automatically use this version.
Existing clusters will have a link displayed at the top of the CloudMan
console offering to perform an automated update.
The new version brings the following
Hi,
I have illumina ChipSeq data and I want to use the Draw quality score
Boxplot
I run thequality format converter (ASCII numeric). But the Draw
quality score Boxplot do an error An error occurred running this
job:Could not find/open font when opening font arial, ..
where is my problem?
Hi AP,
SICER requires BED formatted input with at least 6 columns (for strand
information). You can convert your BAM files into SAM and then into interval
and BED format. Once you have your input in the BED (6+) format, you should be
able to use these tools. Please let us know if we can
Hi Rahul,
This is the maximum number of bases which can have their score not included
when calculating the result of the selected aggregation function.
For example, if you had a 5 base window with scores of 5,5,2,5 and 5, set
aggregation to min score with a specified value of 4, with the
Hi Caroline,
Try to change the default font of gnuplot
http://www.gnuplot.info/faq/faq.html#SECTION0009
On Thu, Nov 24, 2011 at 3:35 PM, Caroline Proux k...@pasteur.fr wrote:
Hi,
I have illumina ChipSeq data and I want to use the Draw quality score
Boxplot
I run thequality
Great work, Enis!
On Nov 28, 2011, at 3:52 AM, Enis Afgan wrote:
A new version of CloudMan for running Galaxy on Amazon cloud has been
released today. Any new cluster will automatically use this version. Existing
clusters will have a link displayed at the top of the CloudMan console
Hello Simon,
You are correct, Galaxy does not have a tool to do this exact operation
in one step, but the Join, Subtract and Group - Group tool may be
able to generate the statistics you want from a tabular file containing
the linked data. Such as: clusterID - sequenceID - barcodeID. Creating
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