[galaxy-user] Question about extracting information from CEAS run results

I have run a ChIPseq work flow in galaxy, At teh end I ran CEAS: Enrichment on chromosome and annotation (version 1.0.0) to annotate the peaks which gave me a pdf file shoiwng distribution of peaks across genome with pie chart as well as well as histogram. It shows that ~5% of my peaks in 5UTR

[galaxy-user] long wait on jobs

Hi, I started a workflow yesterday (user name: antonymerlinj...@gmail.com) and it still hasn't gone past being queued to run. In fact, no jobs are running. Please advice. Thank you. Antony -- Antony M Jose, Dept. of Cell Biology Molecular Genetics, University of Maryland, Rm 2116, Bioscience

[galaxy-user] Extract data and new genes

Hi Everyone, I am working with *Aedes aegypti * and I obtained around 500 million reads (HiSeq2000, 50bp). After doing all analysis of differential gene expression using known packages (Tophat, Cufflinks, Deseq etc) I was able to find a set of gene of interest, besides some functional group of

[galaxy-user] Runtime on public Galaxy and current version of Galaxy on the Cloud?

Hi, I am finding that the run time on the public galaxy is exceptionally long, with job submitted yesterday still waiting to start. Given that I need to have analyses performed more quickly, I have tried to use Galaxy on the Cloud. Is this the following still the current version of cloudman