[galaxy-user] Updates to CloudMan

2012-06-08 Thread Enis Afgan
*We just released an update to CloudMan.* CloudMan offers an easy way to get a personal and completely functional instance of Galaxy in the cloud in just a few minutes, without any manual configuration. *This update brings a large number of updates and new features, the most prominent ones

[galaxy-user] Question about Galaxy

2012-06-08 Thread Jennifer Jackson
Hi Qianli, It looks as if you are using the Extract DNA tool? GTF/GFF files have coordinates with a 1-based start position - and this was your input, but the output from this tool produces coordinates with a BED-style 0-based start position. The genome index files used by the tool are in

[galaxy-user] requirements

2012-06-08 Thread McGowan, Kevin M.
Galaxy team, Where can I find information about the requirements for installing and running Galaxy on our campus. In particular, I'd like to know what type of computer or server I should purchase. Thanks Kevin McGowan Kevin McGowan Manager Molecular Biology and Cell Culture Shared Resources

Re: [galaxy-user] requirements

2012-06-08 Thread Jennifer Jackson
Hi Kevin, The starting place for local install set up is: http://getgalaxy.org There is a lot of information to consider when first getting started and one solution does not fit all, so we started wiki of known hardware configurations, and are encouraging the development community to add in