Re: [galaxy-user] hg19 with rCRS

Hello Rabab, If you click on the pencil icon for a dataset, on the first tab's form Attributes, the Database/Build pull-down menu has a genome listed named: Homo sapiens (hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) This is also available as a built-in reference genome

Re: [galaxy-user] problem uploading bam and bai files

Hi Ann, When loading a BAM dataset, there is no need to load the index, just the BAM file itself. Galaxy will generate the .bai and create a composite dataset. For the problem with detection, my guess is that the file was not named with a .bam extension, making detection problematic. The

[galaxy-user] RE : Cuffmerge error: duplicate GFF ID encountered

Thank you for the reply. I will try this annotation GIF when I get my local galaxy to function. Have a good day, Delong De : Jennifer Jackson [j...@bx.psu.edu] Envoyé : 9 juillet 2013 14:30 À : Delong, Zhou Cc : galaxy-u...@bx.psu.edu Objet : Re: [galaxy-user]