Re: [galaxy-user] Significant in Cuffdiff's ouput

2013-07-22 Thread Dave Clements
Hi Thanh, This is a question about Cuffdiff, rather than about Galaxy directly. Try posting the question to one of these forums: https://groups.google.com/forum/#!forum/tuxedo-tools-users http://seqanswers.com/forums/forumdisplay.php?f=18 - Bioinformatics forum

[galaxy-user] How to process paired reads in Galaxy

2013-07-22 Thread Larry Simpson
Hi Users How do I process paired reads from an Ilumina Miseq platform? If I first use Groomer and then Filter by quality, the paired reads get out of sync. I read some responses to similar questions in this Forum that the paired reads must first be joined before filtering and then split for

[galaxy-user] Problem with downloading

2013-07-22 Thread GANDRILLON OLIVIER
Hi I am trying to download the results of my analysis (.sam files) from Galaxy main. The download gets interrupted about halfway, with no error message, as if the full file had been downloaded (but has not). Thank's for your help Best Olivier Gandrillon smime.p7s Description: S/MIME