[galaxy-user] question

Hi Is it possible to trim a variable number of a specific nucleotide from the 3' ends of fastq RNA reads? The Manipulate Fastq utility in Galaxy may have this ability but I do not know how to create a custom inquiry. Thanks in advance for any assistance. Larry

Re: [galaxy-user] question

You could use the adaptor clip with e.g. a custom poly-A 'adaptor' its in FASTX-Toolkit for FASTQ data best, ido On Jul 28, 2013, at 8:44 PM, Larry Simpson larrys3...@gmail.com wrote: Hi Is it possible to trim a variable number of a specific nucleotide from the 3' ends of fastq RNA