On Fri, Nov 22, 2013 at 8:48 PM, Jennifer Jackson <j...@bx.psu.edu> wrote:
> Hi Seung Hee,
>
> I know we discussed this on the other list, but I didn't point you to the
> open development ticket to (potentially) extend the functions of the "Cut"
> tool. This is not being actively worked on right now, but you can follow it
> for updates if you want.
> https://trello.com/c/CbFSHrU5
>
> Others are still welcome to comment about what types of solutions they might
> have to offer. There is no specific tool to do this on Main right now (or in
> the Tool Shed, from my checks). http://usegalaxy.org/toolshed

This tool of mine might do what Seung Hee wanted,
but I have not tried it on very large Illumina datasets:

http://toolshed.g2.bx.psu.edu/view/peterjc/seq_primer_clip

Regards,

Peter
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