Please note, this sequence chrM_rCRS does not exist in the human/hg19
genome browser at UCSC. It is not a recognized sequence.
There is a note about this on the gateway page:
http://genome.ucsc.edu/cgi-bin/hgGateway?db=hg19
See the paragraph titled: Note on chrM
--Hiram
On 9/12/13 1:25 AM, lilach noy wrote:
Hey there,
I am trying to add a custom track of a bed file through Galaxy and i keep
getting this error:
- Error line 325149 of
https://main.g2.bx.psu.edu/root/display_as?id=11632524display_app=ucscauthz_method=display_at:
chrM_rCRS not a recognized sequence (note: sequence names are case
sensitive)
it happens Whether i try to upload the file as a track directly or if i do
via Galaxy options. Any one knows anything about this issues?
Thanks!
___
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using reply all in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/