Re: [galaxy-user] Error "out of memory" when trying to retrieve output

2013-08-29 Thread Dannon Baker
Do you have debug enabled in your universe_wsgi.ini? IIRC, this causes the entire request to be loaded into memory (which is a bad thing when the response is 20GB). On Thu, Aug 29, 2013 at 3:50 PM, Delong, Zhou wrote: > Hello, > I wanted to download the accepted junction .bam file from tophat

[galaxy-user] Error "out of memory" when trying to retrieve output

2013-08-29 Thread Delong, Zhou
Hello, I wanted to download the accepted junction .bam file from tophat output of my local instance and I get an "out of memory" error. When I examine the server via command line, I found that a python process used by galaxy occupied more than 80% of total memory (on the virtual machine with 10G