Re: [galaxy-user] Text Manipulation Compute c1[1:c1.find(()] fails

2011-08-23 Thread Russell Bell
@lists.bx.psu.edu galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] Text Manipulation Compute c1[1:c1.find(()] fails Message-ID: 4e5282c4.3090...@bx.psu.edu Content-Type: text/plain; charset=windows-1252; format=flowed Hello Curtis, There is some more feedback from our developers. In your own

Re: [galaxy-user] Text Manipulation Compute c1[1:c1.find(()] fails

2011-07-22 Thread Jennifer Jackson
Hello Robert, This tool does sanitize many of the characters required to build this type of regular expression. Some changes to a few of the Text Manipulation tools have been discussed, but nothing is planned for the near term. For now, the most expedient solution is for you to download the

[galaxy-user] Text Manipulation Compute c1[1:c1.find(()] fails

2011-07-20 Thread Robert Curtis Hendrickson
Folks, I have a column c1 that has entries like GXP_297346(PVALB/human). I'm trying to use Text Manipulation Compute to strip off the (...) portion, leaving only the accession (which can vary in length). I have tried a variety of things that work in my python command line, but fail here, for