On Wed, Sep 25, 2013 at 7:27 PM, Lauren Oldfield lm...@pitt.edu wrote:
My question: How can I generate a pileup with an output of more than 8000
hits per base? I was generating pileups using the SAM tools -- Generate
pileup and do not see an option to change the settings for output. In
mpileup
My question: How can I generate a pileup with an output of more than
8000 hits per base? I was generating pileups using the SAM tools --
Generate pileup and do not see an option to change the settings for
output. In mpileup there is a variable that looks correct, -D (Output
per-sample read
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