Re: [galaxy-user] non-coding RNA annotation

Hello, If you are using the Tuxedo suite of tools, then iGenomes is one good resource. The NCBI files represent RefSeq, and RefSeq includes non-coding transcripts. NM_ = coding transcript with defined p_id, tss_id, gene_name NR_ = non-coding transcript with defined tss_id, gene_name

[galaxy-user] non-coding RNA annotation

Hi all, I am analyzing my small RNA sequencing data on mouse tissue. Does anyone know where to download annotation file for non-coding RNA? Thanks Thanh ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other fe