Re: [galaxy-user] server error trying to DL data from galaxy on cloud

2011-03-28 Thread karlerhard
Hello, I'm trying to download the library files I processed on my galaxy cloud instance, but I'm getting an error. At the top (on the right panel) it says Server Error and then lists the URL where the data should be and then lists: Module paste.exceptions.errormiddleware:143 in __call__

Re: [galaxy-user] server error trying to DL data from galaxy on cloud

2011-03-28 Thread Enis Afgan
Hi Karl, Hmm, not having Galaxy accessible is definitely not a step in the right direction. Being signed into command line is not an issue; something else must have gone wrong. To start, please take a look at the (bottom of) galaxy log file (and email the relevant part if you don't see how to fix

Re: [galaxy-user] server error trying to DL data from galaxy on cloud

2011-03-28 Thread Enis Afgan
You're almost there, the command should be executed from your local machine (home directory is fine) and it should look as follows: scp -i path to keyfile ubuntu@publicDNS:/mnt/galaxyData/files/000/dataset_11.dat . (note the 'ubuntu@' before the public DNS and a trailing dot (.) - the dot means

Re: [galaxy-user] server error trying to DL data from galaxy on cloud

2011-03-28 Thread karlerhard
Excellent, it was the trailing dot that I was missing! Thanks so much for the help, I will most certainly be using Galaxy again, it's been very useful so far. karl You're almost there, the command should be executed from your local machine (home directory is fine) and it should look as