Hello Irene,
Please see:
http://wiki.g2.bx.psu.edu/Learn/Datatypes#Learn.2BAC8-Datatypes.Bed
The BED data format was created by UCSC:
http://genome.ucsc.edu/FAQ/FAQformat.html#format1
The TopHat manual also links to the UCSC specification:
http://tophat.cbcb.umd.edu/manual.html (scroll to "TopHat Output")
Thanks!
Jen
Galaxy team
On 7/20/12 5:34 AM, i b wrote:
Hi,
where can I find an explanation of the columns in the splice junctions
output? From 7 to12 they are only numbered
thanks,
ib
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