Re: [galaxy-user] Not able to get data from UCSC table browser

2012-01-03 Thread Nate Coraor
On Dec 22, 2011, at 5:35 PM, Sell, Christian wrote: Hi, I encountered similar problems today. I can’t open some histories, upload data or transfer data between histories. Regards Christian Hi, Due to extremely high load at the time, jobs were delayed. This has been resolved, so

Re: [galaxy-user] ftp upload

2012-01-03 Thread Nate Coraor
On Dec 27, 2011, at 8:52 PM, Gabor Bartha wrote: I have tried to use ftp to upload files to main.g2.bx.psu.edu but the jobs have been failing with: 421 service not available, remote server has closed connection after about 1.5GB. Isn’t ftp the way you are supposed to upload large files?

[galaxy-user] Problem with version_command XML tag

2012-01-03 Thread Greg Edwards
Hi, I'm in the process of adding a proteomics Perl script into a local copy of Galaxy. It seems like the version command in the galaxy/tools/myTools/myPerlTool.xml needs to have a full pathname. The doco indicates this should be enough: version_commandmyPerlTool -version/version_command, and

[galaxy-user] Config info for: Problem with version_command XML tag

2012-01-03 Thread Greg Edwards
Sorry folks, forgot the basics. It's a fresh install on Mac OS X 10.6.8 Started with sh run.sh in /Users/me/bio/galaxy Everything default. hg heads: changeset: 6298:b258de1e6cea tag: tip user:jeremy goecks jeremy.goe...@emory.edu date:Thu Nov 17 15:08:49 2011 -0500