Re: [galaxy-user] RNA seq analysis and GTF files

2011-04-01 Thread Jeremy Goecks
On Mar 31, 2011, at 12:30 PM, wrote: > Hi Jeremy, > I used your exercise to perform an RNA-seq analysis. First I encountered a > problem where the gene IDs were missing from the results. Jen from the Galaxy > team suggested this: > > "Yes, the team has taken a look and there are a few t

[galaxy-user] Unsubscription

2011-04-01 Thread Massimo
Hi, Is there a way to unsubscribe from Galaxy e-mail list? Please, let me know. Thanks Massimo Bionaz PhD Post-doctoral researcher Institute for Genomic Biology, University of Illinois 366 Animal Sciences Laboratory 1207 W. Gregory Dr. Urbana, IL 61801 USA Office Tel: 1-217-3

Re: [galaxy-user] Unsubscription

2011-04-01 Thread Anton Nekrutenko
To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ Anton Nekrutenko http://nekrut.bx.psu.edu http://usegalaxy.org ___ The Galaxy User list should be used for the discussion

Re: [galaxy-user] Galaxy server-FTP

2011-04-01 Thread Nate Coraor
Sher, Falak wrote: > Sorry I did not know there is some special software I need to use, could you > help please ? Have you seen the instructions here?: https://bitbucket.org/galaxy/galaxy-central/wiki/UploadViaFTP Those example screenshots use Cyberduck. FileZilla is also a popular cross-platf

[galaxy-user] Published workflows in papers??

2011-04-01 Thread Surya Saha
Hi, Are there any papers out there that have published links to Galaxy workflows that lets others run the workflows on new data or rerun the original analysis? Thanks -Surya ___ The Galaxy User list should be used for the discussion of Galax

Re: [galaxy-user] Around Pittsburgh on April 6? Attend the Intro to Galaxy Sessions @ Pitt

2011-04-01 Thread Dave Clements
Hello all, I have talked to the Pitt folks and, for all the reasons Christopher listed, they will not be taping or steaming Dan's talk next week. However, given the immediate and strong response asking for this, we will look for opportunities in the coming year to tape a similar extended "Intro t