Re: [galaxy-user] SOLID to fastq for Bowtie

Hello Shalabh, Galaxy is open source and available here: http://bitbucket.org/galaxy/galaxy-central/src/ Check under tools to find: tools/fastq/fastq_groomer.py/.xml Other SOLiD specific tools are under: tools/solid_tools/ The rest is organized in this same general way. This wiki may be

Re: [galaxy-user] Ngs Mapping using LASTZ

Hello Thomas, Using Tophat would be fine. To understand the parameters used, click on the i icon in the job run's dataset box in the history. For certain tools, this is also captured (line command) in the Info: field after the job completes. Take care, Jen Galaxy team On 8/9/11 1:28 AM,