[galaxy-user] ChIP-seq data analysis question

Hello, My name is Christopher Terranova and am a M.S student at the University of Buffalo SUNY.I have been attempting to analyze my MACS data using Galaxy, already have my custom peaks on the UCSC Genome browser and have some specific questions. I am attempting to show how my peaks (and peak

[galaxy-user] email database

hi im the new user at intalling my own galaxy and i developing some of the tools now i face a challenge i need to call the login(now) email address form my tools but i didnt find any API can did this so i was wondering is there had any database store the email address i need to identify the login

Re: [galaxy-user] (no subject)

Hi Megan, I ran a few tests and found that changing the file suffix to .txt when using the autodetect upload type function speed up the loading process considerably. As the final result is an identical Galaxy dataset to what is produced with using the existing suffix, this is something I

Re: [galaxy-user] Create VCF file from samtools pile-up

Hello Geert, To produce and work with VCF data, please see the tool groups 'NGS: Variant Detection' and 'NGS: GATK Tools (beta)'. Each tools has notations about input, outputs, and sources. We are developing additional support within Galaxy for these tools as they move out of beta status.