I am working with the LefSe module. Over the last two days, I am gettimg a
recurring error in the Plot LefSe result step. LefSe analysis itself is
performed OK (I can see the the results in a text browser) but when I want
to plot them - I get a red error message. When I do plot
It sounds like you are using the Galaxy instance run by the Huttenhower
Lab at Harvard? At this link?
If so, then at the bottom of the home page is a link you can use to
contact the lab members about issues with the instance. (They probably
The GATK tool wrappers are still in Beta and are currently under redesign.
Since this question is about a local install, it is probably better for
the galaxy-...@bx.psu.edu mailing list. When you write in (new thread,
please), could you please clarify a bit more? Do you need help with
I am a registered user of the public Galaxy Server (main). Any job I
submitted today is labeled as Job is waiting to run forever. Could you
please let me know the
The Galaxy User list
A job that is grey in color means that it is queued. A job that is
yellow is running - and actual run time can vary.
Generally, jobs will begin to run (move from grey to yellow) within a
short time period or if the public instance is very busy, within 24hrs.
I found three jobs
I brought up this issue previously, I guess Galaxy team please look into it
your user base is expending the jobs never get fisnished. Fisrt problem of
data uplaod and then running jobs. I never had problem but having lot of
problem sfrom last 3-4 months so started using other tools too.
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