[galaxy-user] Galaxy Main - Files not Found, Server Error

Hello, I am getting a resource not found error when I try to view data on the Galaxy Main Server. For some of my FASTQ Groomed files I get: The resource could not be found. File Not Found (/galaxy/main_pool/pool7/files/006/764/dataset_6764692.dat). [[Note the number before .dat changes dependi

Re: [galaxy-user] Galaxy Main - Files not Found, Server Error

Hello Nathan, The view history issue has been resolved. However, there were known failures over the weekend. These jobs should be re-run. The NGS cluster is down at this moment due to a datacenter problem, but is expected to be restored shortly. Queued jobs will process when back up as normal.

Re: [galaxy-user] non-coding RNA annotation

Hello, If you are using the Tuxedo suite of tools, then iGenomes is one good resource. The NCBI files represent RefSeq, and RefSeq includes non-coding transcripts. NM_ = coding transcript with defined p_id, tss_id, gene_name NR_ = non-coding transcript with defined tss_id, gene_name

Re: [galaxy-user] History will not load?

Hello Maria, The issue has been resolved. Our apologies for the inconvenience, Jen Galaxy team On 9/22/13 11:55 AM, Maria Hoffman wrote: Hello, I have been having trouble with Galaxy since yesterday. I have been trying to run cuffdiff which has been waiting to run since Friday afternoon and