Hello Miranda,
The problem is most likely that GFF3 is not supported by the tool (GFF
GTF definitely are). If this is in fact true, I will open a development
ticket to block the datatype as being an accepted input type until (or
if) GFF3 is included. This datatype does not have content
Hello Thierry,
Yes, to set the job parameters with no seeding, using the default
setting for this parameter (-1, aka infinity) is a standard method.
If you read what people are doing, they are split into two camps. Some
go with the default (infinity). Some go with really high -l value, 10k
Hi Eva,
There are a few tools in the Tool Shed that could meet your needs. Start
by looking in the category Metagenomics.
http://usegalaxy.org/toolshed
Tools here are intended to be used in local or cloud Galaxy's. A cloud
is a good choice for many biologists.
http://usegalaxy.org/cloud
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