[galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Eduardo Fox
Hello, Please I would like to know if it would be normal of a job to be queued for several days? It is a SAM to BAM conversion, and it has been waiting for over 5 days to run. I understand that the SAM file is pretty large but other similar conversions I made on the server recently were done

[galaxy-user] question history

2014-03-31 Thread Liesbeth Van Rompay
Hi, Although I am occupying 91% of my space on the Galaxy platform, since Galaxy was out, I cannot access my history anymore. No error message appears. What can I do? Best regards, Liesbeth ___ The Galaxy User list should be used for the

[galaxy-user] April 2014 Galaxy Update Newsletter: GCC2014 Talk Abstracts due this Friday

2014-03-31 Thread Dave Clements
Happy April everyone! It's a busy time in the Galaxyhttps://wiki.galaxyproject.org/GalaxyUpdates/2014_04 and that is reflected in the April 2014 Galaxy Updatehttps://wiki.galaxyproject.org/GalaxyUpdates/2014_04. First, there were a record 63 new

Re: [galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Eduardo Fox
2014-03-31 11:29 GMT+02:00 Eduardo Fox ofoxo...@gmail.com: Hello, Please I would like to know if it would be normal of a job to be queued for several days? It is a SAM to BAM conversion, and it has been waiting for over 5 days to run. I understand that the SAM file is pretty large but other

Re: [galaxy-user] Job of format conversion waiting for over 5 days

2014-03-31 Thread Nate Coraor
Hi Eduardo, I believe the job in question is not running because one of its inputs (#101) failed to have metadata set properly. This situation can be fixed by using the 'auto-detect' button on the failed dataset. --nate On Mon, Mar 31, 2014 at 5:20 PM, Eduardo Fox ofoxo...@gmail.com wrote: