[galaxy-user] Change format with "edit attributes"

2013-04-03 Thread Gema Sanz Santos
Hello, I'm trying to change the format to the output files from Barcode splitter from FASTA to FASTAQ so I can use them in Bowtie for Illumina. I've read that it can be done through the edit attributes, I go to datatype and select fastaq, save and then go to convert format and press convert but th

[galaxy-user] FW: Change format with "edit attributes"

2013-04-03 Thread Gema Sanz Santos
From: Peter Cock Date: Wednesday, April 3, 2013 4:42 PM To: Gema Sanz Santos Cc: Subject: Re: [galaxy-user] Change format with "edit attributes" On Wed, Apr 3, 2013 at 3:40 PM, Gema Sanz Santos wrote: > Hello, > > I'm trying to change the format to the output fil

[galaxy-user] problem with GenomeSpace Exporter

2013-04-12 Thread Gema Sanz Santos
Dear all, I'm trying to send some data from Galaxy to GenomeSpace, so I can work with this data in Cistrome but I always got this error: GURU MEDITATION: #57662f6109d0460791fa7122116f80ce Internal Server Error Galaxy was unable to sucessfully complete your request An error occurred. This may be

[galaxy-user] Error in annotation tools

2013-05-09 Thread Gema Sanz Santos
Hello, I'm using Nebula and when I try to use the annotation tools (genomic annotation and gene annotation in NGS annotation menu) I got always this error despite of the bed file that I use: An error occurred running this job:Unable to run this job due to a cluster error Could you indicate me ho

[galaxy-user] FW: Error in annotation tools

2013-05-09 Thread Gema Sanz Santos
I edit: Actually I canĀ“t do anything in nebula server, even upload data, I got the cluster error all the time From: Gema Sanz Santos Date: Thursday, May 9, 2013 1:14 PM To: Jennifer Jackson Cc: Subject: Error in annotation tools Hello, I'm using Nebula and when I try to us

[galaxy-user] nebula problem

2013-05-09 Thread Gema Sanz Santos
Hello, I'm using Nebula and when I try to use the annotation tools (genomic annotation and gene annotation in NGS annotation menu) I got always this error despite of the bed file that I use: An error occurred running this job:Unable to run this job due to a cluster error I also got this error me