Brad,

We are looking for some advice on going from our current Galaxy to the nglims 
fork of Galaxy you have created.  The last post I've seen on the subject of 
moving to the nglims Galaxy was here:
http://user.list.galaxyproject.org/add-nglims-to-galaxy-dist-td4656015.html

Is it still the case that it "would best to first try it out on a separate 
instance before thinking about integrating with your production Galaxy. It does 
take a bit of tweaking …." ??

Second, when I install the nglims fork of galaxy is there a way to have galaxy 
use the tools  and genomes in bc-bio? On our original install, before we used 
bc-bio, I added tools mainly via the tool shed. It would be nice be to have 
galaxy using the same tools.

Any other advice would be greatly appreciated.

Thanks
Jim
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