Re: [galaxy-user] integrating external Data Sources while running behind a firewall

2011-03-12 Thread Jelle Scholtalbers
Hi Martin, Your galaxy instance does not have to be accessible from outside. The GALAXY_URL is send to the external datasource to create a new url that your browser understands and that galaxy will use to retrieve the data prepared by the service. E.g.

Re: [galaxy-user] why the result files are empty ? and is java applet supported by galaxy system?

2011-08-26 Thread Jelle Scholtalbers
=== Please use Reply All when responding to this email! === Dear Yan-Hui Li, you have to make sure the output files (and location) are named by Galaxy. It isn't enough to just have the output files in the right output directory. Looking at the documentation of phyml it seems you can't set your

Re: [galaxy-user] Installing galaxy with Apache ...

2012-08-23 Thread Jelle Scholtalbers
Hi Neil, with your current apache configuration, you should probably see Galaxy at http://yourip/galaxy This is due to your Rewriterule /galaxy and for that you have also set proxy_prefix = /galaxy in your universe_wsgi.ini You should probably remove the empty galaxy directory under /var/www

Re: [galaxy-user] Installing galaxy with Apache ...

2012-08-24 Thread Jelle Scholtalbers
: Jelle Scholtalbers [j.scholtalb...@gmail.com] Sent: Thursday, August 23, 2012 8:20 PM To: Burdett, Neil (ICT Centre, Herston - RBWH) Cc: galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] Installing galaxy with Apache ... Hi Neil, with your current apache configuration, you should probably