I am new to Galaxy and am using it for analysis of BLAST results and phylogeny. I have uploaded a file with contig names, the BLAST GI number, and the total read count for each contig. When I use Galaxy to 'Summarize taxonomy' and 'Draw phylogeny', I have lost the total read counts. Eg. In the results of these it tells me how many contigs belong to Fungi or Metazoa, whereas each contig actually has a different number of reads. Is there any way to reflect this in Galaxy? I hope this makes sense!
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