Where can I see which version are being used?
You can see both the Galaxy tool version and the Cuffdiff tool version (when
available) by clicking on the 'view details' icon (the 'i' at the bottom of an
expanded dataset). Right now the Cuffdiff version is not displayed, but that
will change
look forward to the update, will that mean another version of Cuffdiff again?
Kind regards,
Johanna
From: Jeremy Goecks [mailto:jeremy.goe...@emory.edu]
Sent: Thursday, August 22, 2013 8:04 PM
To: Johanna Sandgren
Cc: galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Cuffdiff changes
I am
Hi,
I am wondering why Cuffdiff suddenly gives many more significant DE genes?
I have used same input data and now get approx 5x more significant genes,
settings is same with the exception that you now included library normalization
and dispersion estimation. See below for parameters.
I have
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